Peptostreptococcaceae
| Peptostreptococcaceae | |
|---|---|
Scientific classification 
| |
| Domain: | Bacteria |
| Phylum: | Bacillota |
| Class: | Clostridia |
| Order: | Eubacteriales |
| Family: | Peptostreptococcaceae Ezaki 2010[1] |
| Genera | |
|
Acetoanaerobium | |
The Peptostreptococcaceae are a family of Gram-positive anaerobic bacteria in the class Clostridia. A majority of members are identified as obligate anaerobes. The bacteria can be found in humans, vertebrates, manure, soil and hydrothermal vents. Peptostreptococcaceae metabolize via fermentation producing a variety of short-chain fatty acids.[2] The bacteria are important in the digestion process of many ruminants, and in the oral health of vertebrates. Shape of the bacteria varies from cocci, rods or filaments, among species. Most strains fall within the size of 0.6-0.9 μm.[2]
Taxonomy
[edit]Origin of nomenclature is derived from the Greek "peptos", meaning digested, and Streptococcus, a bacterial genus name combine to form Peptostreptococcus—the "digesting streptococcus". [2]
The type genus is Peptostreptococcus, originally described by Kluyver and van Niel in 1936.[3] Recent taxonomic revisions have added several other genera like Acetoanaerobium, Filifactor, Proteocatella, Sporacetigenium, and Tepidibacter to this family, with members largely characterized by their morphology and function.[4] More recent studies have also advocated the inclusion of new genera from a closely related clade, including Peptostreptococcus, Asaccharospora, Clostridioides, Intestinibacter, Paeniclostridium, Paraclostridium, Peptacetobacter, Romboutsia, and Terrisporobacter using 16rRNA gene sequences to support the addition.[4]
Gut Microbiome
[edit]Several members of the Peptostreptococcaceae are well known inhabitants of the digestive tract. Microbiome studies of animal feces have corroborated this. Notably, an unclassified group of Peptostreptococcaceae has been reported making up a significant portion of the microbial community in domestic cats,[5] while other studies have not found a significant presence of Peptostreptococcaceae.[5] Peptostreptococcaceae have been found to be enriched in the gut microbiota of blood drinking species such as vampire bats and the vampire ground finch.[6]
Peptostreptococcus species occupy a specialized niche in the rumen of dairy cows, sheep, and deer as peptide- and amino acid-degrading microorganisms. By producing high levels of ammonia, these bacteria play a crucial role in nitrogen recycling within the rumen ecosystem.[7]
Pathogenesis in Humans
[edit]Clostridioides difficile is a notable human pathogen in this family. Peptostreptococcaceae have been of interest for several other bowel diseases as biological marker or causative agent. Decreased abundance has been reported for Crohn's disease,[8] while the genus Peptostreptococcus appears to be more common in patients diagnosed with colorectal cancer.[9]
Filifactor alocis has been isolated from human oral cavities with gingivitis and is responsible for biofilm formation of periodontitis.[10] An increased abundance of Peptostreptococcus genus can lead to increased risk of acute noma disease and necrotizing gingivitis.[11]
References
[edit]- ^ Page Family Peptostreptococcaceae on "LPSN - List of Prokaryotic names with Standing in Nomenclature". Deutsche Sammlung von Mikroorganismen und Zellkulturen. Retrieved 2022-11-08.
- ^ a b c Rosenberg, Eugene; DeLong, Edward F.; Lory, Stephen; Stackebrandt, Erko; Thompson, Fabiano, eds. (2014). The Prokaryotes: Firmicutes and Tenericutes. Berlin, Heidelberg: Springer Berlin Heidelberg. doi:10.1007/978-3-642-30120-9. ISBN 978-3-642-30119-3.
- ^ Parte, Aidan C. (2013-11-15). "LPSN—list of prokaryotic names with standing in nomenclature". Nucleic Acids Research. 42 (D1): D613–D616. doi:10.1093/nar/gkt1111. ISSN 0305-1048.
- ^ a b Bello, Sarah; McQuay, Sarah; Rudra, Bashudev; Gupta, Radhey S. (February 2024). "Robust demarcation of the family Peptostreptococcaceae and its main genera based on phylogenomic studies and taxon-specific molecular markers". International Journal of Systematic and Evolutionary Microbiology. 74 (2). doi:10.1099/ijsem.0.006247. ISSN 1466-5034. PMID 38319314.
- ^ a b Bermingham EN, Young W, Butowski CF, Moon CD, Maclean PH, Rosendale D, et al. (2018). "The Fecal Microbiota in the Domestic Cat (Felis catus) Is Influenced by Interactions Between Age and Diet; A Five Year Longitudinal Study". Frontiers in Microbiology. 9: 1231. doi:10.3389/fmicb.2018.01231. PMC 6018416. PMID 29971046.
- ^ Song, Se Jin; Sander, Jon G.; Baldassarre, Daniel T.; Chaves, Jaime A.; Johnson, Nicholas S.; Piaggio, Antoinette J.; Stuckey, Matthew J.; Nováková, Eva; Metcalf, Jessica L.; Chomel, Bruno B.; Aguilar-Setién, Alvaro; Knight, Rob; McKenzie, Valerie J. (2019). "Is there convergence of gut microbes in blood-feeding vertebrates?". Philosophical Transactions of the Royal Society B. 374 (1777): 374(1777). doi:10.1098/rstb.2018.0249. PMC 6560276. PMID 31154984.
- ^ Paster, B. J.; Russell, J. B.; Yang, C. M.; Chow, J. M.; Woese, C. R.; Tanner, R. (January 1993). "Phylogeny of the ammonia-producing ruminal bacteria Peptostreptococcus anaerobius, Clostridium sticklandii, and Clostridium aminophilum sp. nov". International Journal of Systematic Bacteriology. 43 (1): 107–110. doi:10.1099/00207713-43-1-107. ISSN 0020-7713. PMID 8427801.
- ^ Pascal V, Pozuelo M, Borruel N, Casellas F, Campos D, Santiago A, et al. (May 2017). "A microbial signature for Crohn's disease". Gut. 66 (5): 813–822. doi:10.1136/gutjnl-2016-313235. PMC 5531220. PMID 28179361.
- ^ Ahn J, Sinha R, Pei Z, Dominianni C, Wu J, Shi J, et al. (December 2013). "Human gut microbiome and risk for colorectal cancer". Journal of the National Cancer Institute. 105 (24): 1907–1911. doi:10.1093/jnci/djt300. PMC 3866154. PMID 24316595.
- ^ Moffatt, C.E.; Whitmore, S.E.; Griffen, A.L.; Leys, E.J.; Lamont, R.J. (December 2011). "Filifactor alocis interactions with gingival epithelial cells". Molecular Oral Microbiology. 26 (6): 365–373. doi:10.1111/j.2041-1014.2011.00624.x. ISSN 2041-1006. PMC 3248241. PMID 22053964.
- ^ Bolivar, Ignacio; Whiteson, Katrine; Stadelmann, Benoît; Baratti-Mayer, Denise; Gizard, Yann; Mombelli, Andrea; Pittet, Didier; Schrenzel, Jacques; Noma (GESNOMA), The Geneva Study Group on (2012-03-06). "Bacterial Diversity in Oral Samples of Children in Niger with Acute Noma, Acute Necrotizing Gingivitis, and Healthy Controls". PLOS Neglected Tropical Diseases. 6 (3): e1556. doi:10.1371/journal.pntd.0001556. ISSN 1935-2735. PMC 3295795. PMID 22413030.
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