Rate-determining step

From Wikipedia, the free encyclopedia
(Redirected from Rate-limiting enzyme)

In chemical kinetics, the overall rate of a reaction is often approximately determined by the slowest step, known as the rate-determining step (RDS or RD-step[1] or r/d step[2][3]) or rate-limiting step. For a given reaction mechanism, the prediction of the corresponding rate equation (for comparison with the experimental rate law) is often simplified by using this approximation of the rate-determining step.

In principle, the time evolution of the reactant and product concentrations can be determined from the set of simultaneous rate equations for the individual steps of the mechanism, one for each step. However, the analytical solution of these differential equations is not always easy, and in some cases numerical integration may even be required.[4] The hypothesis of a single rate-determining step can greatly simplify the mathematics. In the simplest case the initial step is the slowest, and the overall rate is just the rate of the first step.

Also, the rate equations for mechanisms with a single rate-determining step are usually in a simple mathematical form, whose relation to the mechanism and choice of rate-determining step is clear. The correct rate-determining step can be identified by predicting the rate law for each possible choice and comparing the different predictions with the experimental law, as for the example of NO2 and CO below.

The concept of the rate-determining step is very important to the optimization and understanding of many chemical processes such as catalysis and combustion.

Example reaction: NO2 + CO[edit]

As an example, consider the gas-phase reaction NO2 + CO → NO + CO2. If this reaction occurred in a single step, its reaction rate (r) would be proportional to the rate of collisions between NO2 and CO molecules: r = k[NO2][CO], where k is the reaction rate constant, and square brackets indicate a molar concentration. Another typical example is the Zel'dovich mechanism.

First step rate-determining[edit]

In fact, however, the observed reaction rate is second-order in NO2 and zero-order in CO,[5] with rate equation r = k[NO2]2. This suggests that the rate is determined by a step in which two NO2 molecules react, with the CO molecule entering at another, faster, step. A possible mechanism in two elementary steps that explains the rate equation is:

  1. NO2 + NO2 → NO + NO3 (slow step, rate-determining)
  2. NO3 + CO → NO2 + CO2 (fast step)

In this mechanism the reactive intermediate species NO3 is formed in the first step with rate r1 and reacts with CO in the second step with rate r2. However, NO3 can also react with NO if the first step occurs in the reverse direction (NO + NO3 → 2 NO2) with rate r−1, where the minus sign indicates the rate of a reverse reaction.

The concentration of a reactive intermediate such as [NO3] remains low and almost constant. It may therefore be estimated by the steady-state approximation, which specifies that the rate at which it is formed equals the (total) rate at which it is consumed. In this example NO3 is formed in one step and reacts in two, so that

The statement that the first step is the slow step actually means that the first step in the reverse direction is slower than the second step in the forward direction, so that almost all NO3 is consumed by reaction with CO and not with NO. That is, r−1r2, so that r1r2 ≈ 0. But the overall rate of reaction is the rate of formation of final product (here CO2), so that r = r2r1. That is, the overall rate is determined by the rate of the first step, and (almost) all molecules that react at the first step continue to the fast second step.

Pre-equilibrium: if the second step were rate-determining[edit]

The other possible case would be that the second step is slow and rate-determining, meaning that it is slower than the first step in the reverse direction: r2r−1. In this hypothesis, r1 − r−1 ≈ 0, so that the first step is (almost) at equilibrium. The overall rate is determined by the second step: r = r2r1, as very few molecules that react at the first step continue to the second step, which is much slower. Such a situation in which an intermediate (here NO3) forms an equilibrium with reactants prior to the rate-determining step is described as a pre-equilibrium[6] For the reaction of NO2 and CO, this hypothesis can be rejected, since it implies a rate equation that disagrees with experiment.

  1. NO2 + NO2 → NO + NO3 (fast step)
  2. NO3 + CO → NO2 + CO2 (slow step, rate-determining)

If the first step were at equilibrium, then its equilibrium constant expression permits calculation of the concentration of the intermediate NO3 in terms of more stable (and more easily measured) reactant and product species:

The overall reaction rate would then be

which disagrees with the experimental rate law given above, and so disproves the hypothesis that the second step is rate-determining for this reaction. However, some other reactions are believed to involve rapid pre-equilibria prior to the rate-determining step, as shown below.

Nucleophilic substitution[edit]

Another example is the unimolecular nucleophilic substitution (SN1) reaction in organic chemistry, where it is the first, rate-determining step that is unimolecular. A specific case is the basic hydrolysis of tert-butyl bromide (t-C
4
H
9
Br
) by aqueous sodium hydroxide. The mechanism has two steps (where R denotes the tert-butyl radical t-C
4
H
9
):

  1. Formation of a carbocation R−Br → R+
    + Br
    .
  2. Nucleophilic attack by hydroxide ion R+
    + OH
    → ROH.

This reaction is found to be first-order with r = k[R−Br], which indicates that the first step is slow and determines the rate. The second step with OH is much faster, so the overall rate is independent of the concentration of OH.

In contrast, the alkaline hydrolysis of methyl bromide (CH
3
Br
) is a bimolecular nucleophilic substitution (SN2) reaction in a single bimolecular step. Its rate law is second-order: r = k[R−Br][OH
].

Composition of the transition state[edit]

A useful rule in the determination of mechanism is that the concentration factors in the rate law indicate the composition and charge of the activated complex or transition state.[7] For the NO2–CO reaction above, the rate depends on [NO2]2, so that the activated complex has composition N
2
O
4
, with 2 NO2 entering the reaction before the transition state, and CO reacting after the transition state.

A multistep example is the reaction between oxalic acid and chlorine in aqueous solution: H
2
C
2
O
4
+ Cl
2
→ 2 CO2 + 2 H+
+ 2 Cl
.[7] The observed rate law is

which implies an activated complex in which the reactants lose 2H+
+ Cl
before the rate-determining step. The formula of the activated complex is Cl
2
+ H
2
C
2
O
4
− 2 H+
Cl
+ xH2O, or C
2
O
4
Cl(H
2
O)
x
(an unknown number of water molecules are added because the possible dependence of the reaction rate on H2O was not studied, since the data were obtained in water solvent at a large and essentially unvarying concentration).

One possible mechanism in which the preliminary steps are assumed to be rapid pre-equilibria occurring prior to the transition state is[7]

Cl
2
+ H2O ⇌ HOCl + Cl
+ H+
H
2
C
2
O
4
H+
+ HC
2
O
4
HOCl + HC
2
O
4
H2O + Cl
+ 2 CO2

Reaction coordinate diagram[edit]

In a multistep reaction, the rate-determining step does not necessarily correspond to the highest Gibbs energy on the reaction coordinate diagram.[8][6] If there is a reaction intermediate whose energy is lower than the initial reactants, then the activation energy needed to pass through any subsequent transition state depends on the Gibbs energy of that state relative to the lower-energy intermediate. The rate-determining step is then the step with the largest Gibbs energy difference relative either to the starting material or to any previous intermediate on the diagram.[8][9]

Also, for reaction steps that are not first-order, concentration terms must be considered in choosing the rate-determining step.[8][6]

Chain reactions[edit]

Not all reactions have a single rate-determining step. In particular, the rate of a chain reaction is usually not controlled by any single step.[8]

Diffusion control[edit]

In the previous examples the rate determining step was one of the sequential chemical reactions leading to a product. The rate-determining step can also be the transport of reactants to where they can interact and form the product. This case is referred to as diffusion control and, in general, occurs when the formation of product from the activated complex is very rapid and thus the provision of the supply of reactants is rate-determining.

See also[edit]

References[edit]

  1. ^ Kozuch, Sebastian; Martin, Jan (June 2011). "The Rate-Determining Step is Dead. Long Live the Rate-Determining State". ChemPhysChem DOI:10.1002/CPHC.201100137. 12 (8): 1413–1418. doi:10.1002/cphc.201100137. PMID 21523880 – via PubMed.
  2. ^ {{Organic Chemistry, Volume 1, 6/E By Finar}}
  3. ^ {{Aliphatic Organic Chemistry By Amit Arora}}
  4. ^ Steinfeld J. I., Francisco J. S., Hase W. L. Chemical Kinetics and Dynamics (2nd ed., Prentice-Hall 1999) ch. 2.
  5. ^ Whitten K. W., Galley K. D., Davis R. E. General Chemistry (4th edition, Saunders 1992), p. 638–639.
  6. ^ a b c Peter Atkins and Julio de Paula, Physical Chemistry (8th ed., W. H. Freeman 2006) p. 814–815. ISBN 0-7167-8759-8.
  7. ^ a b c Espenson, J. H. (2002). Chemical Kinetics and Reaction Mechanisms (2nd ed.). McGraw-Hill. pp. 127–132. ISBN 0072883626.
  8. ^ a b c d Keith J. Laidler. Chemical Kinetics (3rd ed., Harper and Row 1987) p. 283–285. ISBN 0-06-043862-2.
  9. ^ Murdoch, Joseph R. (1981). "What is the rate-limiting step of a multistep reaction?". Journal of Chemical Education. 58 (1): 32–36. Bibcode:1981JChEd..58...32M. doi:10.1021/ed058p32.