File:Computational design and evaluation of DNA circuits to achieve optimal performance.svg

Page contents not supported in other languages.
This is a file from the Wikimedia Commons
From Wikipedia, the free encyclopedia

Original file(SVG file, nominally 512 × 484 pixels, file size: 471 KB)

Summary

Description
English: Synthetic biology tools are used to establish combinatorial optimization methods. The generated library is profiled using barcoding tools and biosensors allow to screen top producers within the library (gray area). Nature is a vital source of identified nutrients and pharmaceuticals. Metabolic engineering applies synthetic biology tools to produce compounds of the characterized biosynthetic pathway in a desired host (blue area). The production of certain compounds can be optimized using combinatorial optimization strategies. The data obtained from combinatorial library and its pre-characterized modules are computationally integrated to establish mathematical models to support the early design steps for chosen host on the basis of genome-scale metabolic modelling. The computational data suggest which synthetic pathways are the most promising in a given target organism and which host pathway genes need to be upregulated or be silenced based on knowledge of how different cellular subsystems work together. The best producers in combinatorial libraries can provide detailed information to feed into models that aim to uncover principles of how synthetic circuits behave in host systems. Blue arrows, regulators. Orange squares, CDSs. Brown “T”, terminators.[1]
Date
Source https://doi.org/10.1038/s41467-020-16175-y
Author Gita Naseri & Mattheos A. G. Koffas

Licensing

© The copyright holder of this file allows anyone to use it for any purpose, provided that the copyright holder is properly attributed. Redistribution, derivative work, commercial use, and all other use is permitted.

  1. Template:CC-notice

Captions

Computational design and evaluation of DNA circuits to achieve optimal performance

Items portrayed in this file

depicts

15 May 2020

image/svg+xml

cf58b6c0c148c57e65c453638bbcd0f2187a516b

482,672 byte

484 pixel

512 pixel

File history

Click on a date/time to view the file as it appeared at that time.

Date/TimeThumbnailDimensionsUserComment
current22:02, 17 May 2020Thumbnail for version as of 22:02, 17 May 2020512 × 484 (471 KB)Rob HurtUploaded a work by Gita Naseri & Mattheos A. G. Koffas from https://doi.org/10.1038/s41467-020-16175-y with UploadWizard
The following pages on the English Wikipedia use this file (pages on other projects are not listed):

Global file usage

The following other wikis use this file:

Metadata